Transcript: lnc-ARL11-6:1

Basic information

LNCipedia transcript ID: lnc-ARL11-6:1 
LNCipedia gene ID: lnc-ARL11-6
Ensembl Gene ID: ENSG00000276436
Ensembl Transcript ID: ENST00000615830
Location (hg38): chr13:49792886-49793307
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 422 bp
Exons: 1
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000615830.1
Alternative gene names: ENSG00000276436.1; RP11-195L15.2; AL136301.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -127.1863 non-coding 
CPAT coding probability 3.15% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ARL11-6:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-ARL11-6:1
4.1 lnc-ARL11-6:1
5.0 lnc-ARL11-6:1
5.1 lnc-KL-182:1
5.2 lnc-ARL11-6:1