Transcript: lnc-ARL16-1:2

Basic information

LNCipedia transcript ID: lnc-ARL16-1:2 
LNCipedia gene ID: lnc-ARL16-1
Location (hg38): chr17:81701324-81703302
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1979 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000262049.1|ENST00000575312.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 40.3108 non-coding 
CPAT coding probability 5.37% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ARL16-1:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ARL16-1:2
5.0 lnc-ARL16-1:2
5.1 lnc-NPLOC4-6:1
5.2 lnc-ARL16-1:2