Transcript: lnc-ARL4A-54:9

Basic information

LNCipedia transcript ID: lnc-ARL4A-54:9 
LNCipedia gene ID: lnc-ARL4A-54
Location (hg38): chr7:13731356-13743580
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 341 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00013350; NONHSAT119256
Alternative gene names: XLOC_005989; linc-LOC100129335-4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -18.1424 non-coding 
CPAT coding probability 0.03% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ARL4A-54:9 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ARL4A-2:1
3.1 lnc-ARL4A-2:1
4.0 lnc-ARL4A-2:1
4.1 lnc-ARL4A-2:1
5.0 lnc-ARL4A-2:1
5.1 lnc-AHR-54:9
5.2 lnc-ARL4A-54:9