Transcript: lnc-ARL6-1:1

Basic information

LNCipedia transcript ID: lnc-ARL6-1:1 
LNCipedia gene ID: lnc-ARL6-1
Location (hg38): chr3:97759523-97761530
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2008 bp
Exons: 1
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000562191.1; RP11-389G6.3-001; OTTHUMT00000430907.1; NONHSAT090775
Alternative gene names: ENSG00000261292.1; RP11-389G6.3; OTTHUMG00000175728.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -44.1723 non-coding 
CPAT coding probability 0.23% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ARL6-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ARL6-1:1
4.0 lnc-ARL6-1:1
4.1 lnc-ARL6-1:1
5.0 lnc-ARL6-1:1
5.1 lnc-CRYBG3-4:1
5.2 lnc-ARL6-1:1