Transcript: lnc-ARL6IP1-2:2

Basic information

LNCipedia transcript ID: lnc-ARL6IP1-2:2 
LNCipedia gene ID: lnc-ARL6IP1-2
Location (hg38): chr16:18782968-18786795
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 3828 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT140850
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 1 coding 
Peptide Confidence Reading frame
WQNNLLPSR 100% sense-2
Lee translation initiation sites 0 non-coding 
PhyloCSF score 123.5611 coding 
CPAT coding probability 9.11% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-ARL6IP1-2:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP11-1035H13.3.1-2:1
4.0 lnc-RP11-1035H13.3.1-2:1
4.1 lnc-RP11-1035H13.3.1-2:1
5.0 lnc-RP11-1035H13.3.1-2:1
5.1 lnc-MARF1-40:1
5.2 lnc-ARL6IP1-2:2