Transcript: lnc-ARL6IP1-3:1

Basic information

LNCipedia transcript ID: lnc-ARL6IP1-3:1 
LNCipedia gene ID: lnc-ARL6IP1-3
Location (hg38): chr16:18856338-18861487
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 4187 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT140858
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 433.3482 coding 
CPAT coding probability 1.21% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-ARL6IP1-3:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ARL6IP1-3:1
4.0 lnc-ARL6IP1-3:1
4.1 lnc-ARL6IP1-3:1
5.0 lnc-ARL6IP1-3:1
5.1 lnc-MARF1-45:1
5.2 lnc-ARL6IP1-3:1