Transcript: lnc-ARMC6-1:2

Basic information

LNCipedia transcript ID: lnc-ARMC6-1:2 
LNCipedia gene ID: lnc-ARMC6-1
Location (hg38): chr19:18990893-18993610
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2416 bp
Exons: 2
Sources: NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: NONHSAT063012; ENST00000594142.1
Alternative gene names: ENSG00000269131.1; AC004447.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -78.6528 non-coding 
CPAT coding probability 28.49% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ARMC6-1:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ARMC6-1:2
4.0 lnc-ARMC6-1:2
4.1 lnc-ARMC6-1:2
5.0 lnc-ARMC6-1:2
5.1 lnc-MPV17L2-27:1
5.2 lnc-ARMC6-1:2