Transcript: lnc-ARRDC4-3:1

Basic information

LNCipedia transcript ID: lnc-ARRDC4-3:1 
LNCipedia gene ID: lnc-ARRDC4-3
Ensembl Gene ID: ENSG00000259041
Ensembl Transcript ID: ENST00000557499
Location (hg38): chr15:98282075-98285907
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 385 bp
Exons: 3
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000557499; ENST00000557499.1; RP11-167B3.1-001; OTTHUMT00000415222.1; NONHSAT050772
Alternative gene names: ENSG00000259041; RP11-167B3.1; ENSG00000259041.1; OTTHUMG00000171823.1; AC015722.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -198.2416 non-coding 
CPAT coding probability 14.37% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ARRDC4-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ARRDC4-2:1
3.1 lnc-ARRDC4-3:1
4.0 lnc-ARRDC4-3:1
4.1 lnc-ARRDC4-3:1
5.0 lnc-ARRDC4-3:1
5.1 lnc-ARRDC4-3:1
5.2 lnc-ARRDC4-3:1