Transcript: lnc-ART5-1:2

Basic information

LNCipedia transcript ID: lnc-ART5-1:2 
LNCipedia gene ID: lnc-ART5-1
Ensembl Gene ID: ENSG00000255367
Ensembl Transcript ID: ENST00000526533
RefSeq ID: NR_126335
Location (hg38): chr11:3507980-3571987
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 578 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Refseq - Dec 2014; Ensembl release 83 - Dec 2015; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: ENST00000526533.1; RP13-726E6.2-001; OTTHUMT00000392274.1; NONHSAT017598; NR_126335; NR_126335.1
Alternative gene names: ENSG00000255367.1; RP13-726E6.2; OTTHUMG00000166987.1; ENSG00000255367.3; AC127526.4; LOC101927708; AC127526.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -89.0285 non-coding 
CPAT coding probability 1.02% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ART5-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ART5-1:2
4.0 lnc-ART5-1:2
4.1 lnc-ART5-1:2
5.0 lnc-ART5-1:2
5.1 lnc-OR52A1-31:4
5.2 lnc-ART5-1:2