Transcript: lnc-ARVCF-4:8

Basic information

LNCipedia transcript ID: lnc-ARVCF-4:8 
LNCipedia gene ID: lnc-ARVCF-4
Location (hg38): chr22:20064051-20070070
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1330 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT083475
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -23.717 non-coding 
CPAT coding probability 2.41% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ARVCF-4:8 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TRMT2A-2:8
4.0 lnc-ARVCF-4:8
4.1 lnc-ARVCF-4:8
5.0 lnc-ARVCF-4:8
5.1 lnc-RTN4R-9:8
5.2 lnc-ARVCF-4:8