Transcript: lnc-ASAH2B-3:1

Basic information

LNCipedia transcript ID: lnc-ASAH2B-3:1 
LNCipedia gene ID: lnc-ASAH2B-3
Location (hg38): chr10:50472814-50474246
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 373 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000437213.1; RP11-512N4.2-001; OTTHUMT00000048069.1; NONHSAT013382
Alternative gene names: ENSG00000225303.1; RP11-512N4.2; OTTHUMG00000018228.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -86.9703 non-coding 
CPAT coding probability 5.13% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ASAH2B-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ASAH2B-3:1
4.0 lnc-ASAH2B-3:1
4.1 lnc-ASAH2B-3:1
5.0 lnc-ASAH2B-3:1
5.1 lnc-PRKG1-3:1
5.2 lnc-ASAH2B-3:1