Transcript: lnc-ASB15-2:1

Basic information

LNCipedia transcript ID: lnc-ASB15-2:1 
LNCipedia gene ID: lnc-ASB15-2
Location (hg38): chr7:123535224-123535819
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 322 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00014197; NONHSAT123045
Alternative gene names: XLOC_006223; linc-ASB15-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -34.3703 non-coding 
CPAT coding probability 2.11% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ASB15-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ASB15-2:1
3.1 lnc-ASB15-2:1
4.0 lnc-ASB15-2:1
4.1 lnc-ASB15-2:1
5.0 lnc-ASB15-2:1
5.1 lnc-SPAM1-14:1
5.2 lnc-ASB15-2:1