Transcript: lnc-ASB3-1:6

Basic information

LNCipedia transcript ID: lnc-ASB3-1:6 
LNCipedia gene ID: lnc-ASB3-1
Location (hg38): chr2:52722486-52934609
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 853 bp
Exons: 5
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000048410.1|MICT00000189419.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -165.8735 non-coding 
CPAT coding probability 0.06% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ASB3-1:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ASB3-1:6
5.0 lnc-ASB3-1:6
5.1 lnc-PPP4R3B-54:3
5.2 lnc-ASB3-1:6