Transcript: lnc-ASCC1-4:5

Basic information

LNCipedia transcript ID: lnc-ASCC1-4:5 
LNCipedia gene ID: lnc-ASCC1-4
Location (hg38): chr10:72271973-72273711
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 817 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000000105.1|MICT00000043746.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -312.5486 non-coding 
CPAT coding probability 0.63% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ASCC1-4:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ASCC1-4:5
5.0 lnc-ASCC1-4:5
5.1 lnc-VSIR-8:3
5.2 lnc-ASCC1-4:5