Transcript: lnc-ASCL1-2:1

Basic information

LNCipedia transcript ID: lnc-ASCL1-2:1 
LNCipedia gene ID: lnc-ASCL1-2
Location (hg38): chr12:102950612-102951445
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 288 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00020541; NONHSAT030344
Alternative gene names: XLOC_009856; linc-ASCL1-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score non-coding 
CPAT coding probability 3.99% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ASCL1-2:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ASCL1-2:1
3.1 lnc-ASCL1-2:1
4.0 lnc-ASCL1-2:1
4.1 lnc-ASCL1-2:1
5.0 lnc-ASCL1-2:1
5.1 lnc-STAB2-8:1
5.2 lnc-ASCL1-2:1