Transcript: lnc-ASXL1-2:3

Basic information

LNCipedia transcript ID: lnc-ASXL1-2:3 
LNCipedia gene ID: lnc-ASXL1-2
Location (hg38): chr20:32561133-32574363
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 907 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT079363
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -24.7851 non-coding 
CPAT coding probability 11.07% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ASXL1-2:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP11-410N8.4.1-2:2
4.0 lnc-RP11-410N8.4.1-2:2
4.1 lnc-RP11-410N8.4.1-2:2
5.0 lnc-RP11-410N8.4.1-2:2
5.1 lnc-BPIFB2-5:2
5.2 lnc-ASXL1-2:3