Transcript: lnc-ATAD2B-7:1

Basic information

LNCipedia transcript ID: lnc-ATAD2B-7:1 
LNCipedia gene ID: lnc-ATAD2B-7
Location (hg38): chr2:23609742-23617999
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 4922 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000047893.1|MICT00000186027.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -9.5374 non-coding 
CPAT coding probability 14.36% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ATAD2B-7:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-AC011239.1.1-7:2
5.0 lnc-AC011239.1.1-7:2
5.1 lnc-DNAJC27-43:1
5.2 lnc-ATAD2B-7:1