Transcript: lnc-ATAD5-9:10

Basic information

LNCipedia transcript ID: lnc-ATAD5-9:10 
LNCipedia gene ID: lnc-ATAD5-9
Location (hg38): chr17:30709641-30758218
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 287 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00025887; NONHSAT052813
Alternative gene names: XLOC_012162; linc-ATAD5-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 37.162 non-coding 
CPAT coding probability 1.29% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ATAD5-9:10 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ATAD5-1:2
3.1 lnc-ATAD5-3:2
4.0 lnc-ATAD5-3:2
4.1 lnc-ATAD5-3:2
5.0 lnc-ATAD5-3:2
5.1 lnc-NSRP1-19:10
5.2 lnc-ATAD5-9:10