Transcript: lnc-ATAD5-9:20

Basic information

LNCipedia transcript ID: lnc-ATAD5-9:20 
LNCipedia gene ID: lnc-ATAD5-9
Location (hg38): chr17:30734063-30770049
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1559 bp
Exons: 7
Sources: Ensembl release 64 - Sep 2011
Alternative transcript names: ENST00000502024
Alternative gene names: ENSG00000247185; SUZ12P


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 16.5621 non-coding 
CPAT coding probability 1.02% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ATAD5-9:20 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ATAD5-1:5
3.1 lnc-ATAD5-3:5
4.0 lnc-ATAD5-3:5
4.1 lnc-ATAD5-3:5
5.0 lnc-ATAD5-3:5
5.1 lnc-NSRP1-19:20
5.2 lnc-ATAD5-9:20