Transcript: lnc-ATAD5-9:3

Basic information

LNCipedia transcript ID: lnc-ATAD5-9:3 
LNCipedia gene ID: lnc-ATAD5-9
Location (hg38): chr17:30709461-30776402
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1098 bp
Exons: 9
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA567:2
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -13.807 non-coding 
CPAT coding probability 1.04% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ATAD5-9:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-ATAD5-3:22
4.1 lnc-ATAD5-3:22
5.0 lnc-ATAD5-3:22
5.1 lnc-NSRP1-19:3
5.2 lnc-ATAD5-9:3