Transcript: lnc-ATAD5-9:5

Basic information

LNCipedia transcript ID: lnc-ATAD5-9:5 
LNCipedia gene ID: lnc-ATAD5-9
Location (hg38): chr17:30709604-30769985
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 688 bp
Exons: 5
Sources: NONCODE v4
Alternative transcript names: NONHSAT052810
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 41.6543 non-coding 
CPAT coding probability 51.50% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-ATAD5-9:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ATAD5-3:8
4.0 lnc-ATAD5-3:8
4.1 lnc-ATAD5-3:8
5.0 lnc-ATAD5-3:8
5.1 lnc-NSRP1-19:5
5.2 lnc-ATAD5-9:5