Transcript: lnc-ATE1-5:1

Basic information

LNCipedia transcript ID: lnc-ATE1-5:1 
LNCipedia gene ID: lnc-ATE1-5
Location (hg38): chr10:121957141-121975216
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 2399 bp
Exons: 11
Sources: NONCODE v4
Alternative transcript names: NONHSAT016724
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 1 non-coding 
PhyloCSF score 1278.5749 coding 
CPAT coding probability 65.05% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-ATE1-5:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ATE1-5:1
4.0 lnc-ATE1-5:1
4.1 lnc-ATE1-5:1
5.0 lnc-ATE1-5:1
5.1 lnc-UROS-29:1
5.2 lnc-ATE1-5:1