Transcript: lnc-ATF7IP2-3:7

Basic information

LNCipedia transcript ID: lnc-ATF7IP2-3:7 
LNCipedia gene ID: lnc-ATF7IP2-3
Location (hg38): chr16:10387092-10387737
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 559 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT140503
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -154.2565 non-coding 
CPAT coding probability 3.19% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ATF7IP2-3:7 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ATF7IP2-3:7
4.0 lnc-ATF7IP2-3:7
4.1 lnc-ATF7IP2-3:7
5.0 lnc-ATF7IP2-3:7
5.1 lnc-PDXDC1-64:6
5.2 lnc-ATF7IP2-3:7