Transcript: lnc-ATG2B-16:2

Basic information

LNCipedia transcript ID: lnc-ATG2B-16:2 
LNCipedia gene ID: lnc-ATG2B-16
RefSeq ID: NR_122121
Location (hg38): chr14:96501648-96502326
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 679 bp
Exons: 1
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_122121; NR_122121.1
Alternative gene names: LOC730202


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -87.946 non-coding 
CPAT coding probability 7.30% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ATG2B-16:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ATG2B-2:4
4.0 lnc-ATG2B-2:4
4.1 lnc-ATG2B-2:4
5.0 lnc-ATG2B-2:4
5.1 lnc-TCL1A-20:2
5.2 lnc-ATG2B-16:2