Transcript: lnc-ATG2B-5:2

Basic information

LNCipedia transcript ID: lnc-ATG2B-5:2 
LNCipedia gene ID: lnc-ATG2B-5
Location (hg38): chr14:96266446-96266698
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 253 bp
Exons: 1
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT039517; FPKM1_group_9516_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -128.6871 non-coding 
CPAT coding probability 4.28% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ATG2B-5:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP11-404P21.6.1-5:1
4.0 lnc-RP11-404P21.6.1-5:1
4.1 lnc-RP11-404P21.6.1-5:1
5.0 lnc-RP11-404P21.6.1-5:1
5.1 lnc-TCL1A-5:1
5.2 lnc-ATG2B-5:2