Transcript: lnc-ATG9B-2:9

Basic information

LNCipedia transcript ID: lnc-ATG9B-2:9 
LNCipedia gene ID: lnc-ATG9B-2
Location (hg38): chr7:151012260-151014482
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1328 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT124164
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 103.6234 coding 
CPAT coding probability 20.13% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-ATG9B-2:9 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CDK5-2:16
4.0 lnc-CDK5-2:16
4.1 lnc-CDK5-2:16
5.0 lnc-CDK5-2:16
5.1 lnc-KMT2C-37:9
5.2 lnc-ATG9B-2:9