Transcript: lnc-ATL2-1:10

Basic information

LNCipedia transcript ID: lnc-ATL2-1:10 
LNCipedia gene ID: lnc-ATL2-1
Location (hg38): chr2:38457164-38515661
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2596 bp
Exons: 6
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000231367.1|HBMT00000802586.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -15.0535 non-coding 
CPAT coding probability 2.25% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ATL2-1:10 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ATL2-1:10
5.0 lnc-ATL2-1:10
5.1 lnc-MAP4K3-29:6
5.2 lnc-ATL2-1:10