Transcript: lnc-ATL2-1:11

Basic information

LNCipedia transcript ID: lnc-ATL2-1:11 
LNCipedia gene ID: lnc-ATL2-1
Location (hg38): chr2:38462972-38515661
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 7004 bp
Exons: 5
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000231367.1|MICT00000187931.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -1.7442 non-coding 
CPAT coding probability 22.64% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ATL2-1:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ATL2-1:11
5.0 lnc-ATL2-1:11
5.1 lnc-MAP4K3-29:7
5.2 lnc-ATL2-1:11