Transcript: lnc-ATP23-89:11

Basic information

LNCipedia transcript ID: lnc-ATP23-89:11 
LNCipedia gene ID: lnc-ATP23-89
Location (hg38): chr12:58812023-58812654
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 252 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00021152; NONHSAT029034
Alternative gene names: XLOC_009781; linc-SLC16A7-3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score non-coding 
CPAT coding probability 13.61% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ATP23-89:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-SLC16A7-3:4
3.1 lnc-SLC16A7-3:4
4.0 lnc-RP11-362K2.2.1-3:11
4.1 lnc-RP11-362K2.2.1-3:11
5.0 lnc-RP11-362K2.2.1-3:11
5.1 lnc-CDK2-89:11
5.2 lnc-ATP23-89:11