Transcript: lnc-ATP23-89:5

Basic information

LNCipedia transcript ID: lnc-ATP23-89:5 
LNCipedia gene ID: lnc-ATP23-89
RefSeq ID: NR_126341
Location (hg38): chr12:58591702-58812669
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 423 bp
Exons: 2
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_126341.1
Alternative gene names: LOC100506869


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -273.9523 non-coding 
CPAT coding probability 3.59% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ATP23-89:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-CDK2-89:5
5.1 lnc-CDK2-89:5
5.2 lnc-ATP23-89:5