Transcript: lnc-ATP5F1D-3:2

Basic information

LNCipedia transcript ID: lnc-ATP5F1D-3:2 
LNCipedia gene ID: lnc-ATP5F1D-3
Location (hg38): chr19:1238143-1239615
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 336 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000267778.1|ENCT00000200183.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -51.2177 non-coding 
CPAT coding probability 1.15% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ATP5F1D-3:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ATP5D-3:2
5.0 lnc-ATP5D-3:2
5.1 lnc-RPL36-148:2
5.2 lnc-ATP5F1D-3:2