Transcript: lnc-ATP5PO-1:3

Basic information

LNCipedia transcript ID: lnc-ATP5PO-1:3 
LNCipedia gene ID: lnc-ATP5PO-1
Location (hg38): chr21:33967261-33968468
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 326 bp
Exons: 2
Sources: Broad Institute
Alternative transcript names: TCONS_00029280
Alternative gene names: XLOC_014063; linc-ATP5O-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -77.9388 non-coding 
CPAT coding probability 13.45% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ATP5PO-1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ATP5O-1:2
3.1 lnc-ATP5O-1:2
4.0 lnc-ATP5O-1:2
4.1 lnc-ATP5O-1:2
5.0 lnc-ATP5O-1:2
5.1 lnc-CRYZL1-10:3
5.2 lnc-ATP5PO-1:3