Transcript: lnc-ATP5PO-3:1

Basic information

LNCipedia transcript ID: lnc-ATP5PO-3:1 
LNCipedia gene ID: lnc-ATP5PO-3
Location (hg38): chr21:33959802-33961291
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1490 bp
Exons: 1
Sources: Nielsen et al.,2014
Alternative transcript names: refGeneNc_2503_NR_026812
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 5.6037 non-coding 
CPAT coding probability 1.37% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ATP5PO-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ATP5O-3:1
4.0 lnc-ATP5O-3:1
4.1 lnc-ATP5O-3:1
5.0 lnc-ATP5O-3:1
5.1 lnc-CRYZL1-9:1
5.2 lnc-ATP5PO-3:1