Transcript: lnc-ATP6AP2-4:2

Basic information

LNCipedia transcript ID: lnc-ATP6AP2-4:2 
LNCipedia gene ID: lnc-ATP6AP2-4
Location (hg38): chrX:40006363-40012427
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 5559 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000223486.1|MICT00000373354.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -9.8786 non-coding 
CPAT coding probability 8.71% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ATP6AP2-4:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ATP6AP2-4:2
5.0 lnc-ATP6AP2-4:2
5.1 lnc-CHST7-81:1
5.2 lnc-ATP6AP2-4:2