Transcript: lnc-ATP6V0A1-4:2

Basic information

LNCipedia transcript ID: lnc-ATP6V0A1-4:2 
LNCipedia gene ID: lnc-ATP6V0A1-4
Location (hg38): chr17:42423399-42442011
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1715 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000031420.1|MICT00000147737.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 1.4377 non-coding 
CPAT coding probability 1.11% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ATP6V0A1-4:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ATP6V0A1-4:2
5.0 lnc-ATP6V0A1-4:2
5.1 lnc-ATP6V0A1-4:2
5.2 lnc-ATP6V0A1-4:2