Transcript: lnc-ATP6V1C1-9:3

Basic information

LNCipedia transcript ID: lnc-ATP6V1C1-9:3 
LNCipedia gene ID: lnc-ATP6V1C1-9
Location (hg38): chr8:102999065-103002425
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3361 bp
Exons: 1
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT128145; FPKM1_group_31923_transcript_3
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 23.7115 non-coding 
CPAT coding probability 1.05% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ATP6V1C1-9:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-KB-1507C5.2.1-2:2
4.0 lnc-ATP6V1C1-9:3
4.1 lnc-ATP6V1C1-9:3
5.0 lnc-ATP6V1C1-9:3
5.1 lnc-COLEC10-81:1
5.2 lnc-ATP6V1C1-9:3