Transcript: lnc-ATP6V1C1-9:4

Basic information

LNCipedia transcript ID: lnc-ATP6V1C1-9:4 
LNCipedia gene ID: lnc-ATP6V1C1-9
Location (hg38): chr8:102999343-103070401
Strand: +
Class: sense-overlapping
Sequence Ontology term: sense_overlap_ncRNA
Transcript size: 3896 bp
Exons: 8
Sources: Nielsen et al.,2014
Alternative transcript names: l_3662_chr8:104011570-104059274_thyroid
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 17.8307 non-coding 
CPAT coding probability 1.07% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ATP6V1C1-9:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-KB-1507C5.2.1-2:3
4.0 lnc-ATP6V1C1-9:4
4.1 lnc-ATP6V1C1-9:4
5.0 lnc-ATP6V1C1-9:4
5.1 lnc-COLEC10-81:2
5.2 lnc-ATP6V1C1-9:4