Transcript: lnc-ATP6V1C1-9:5

Basic information

LNCipedia transcript ID: lnc-ATP6V1C1-9:5 
LNCipedia gene ID: lnc-ATP6V1C1-9
Location (hg38): chr8:103006498-103006993
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 496 bp
Exons: 1
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT128146; FPKM1_group_31924_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -19.1268 non-coding 
CPAT coding probability 1.63% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ATP6V1C1-9:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-KB-1507C5.2.1-2:4
4.0 lnc-ATP6V1C1-9:5
4.1 lnc-ATP6V1C1-9:5
5.0 lnc-ATP6V1C1-9:5
5.1 lnc-COLEC10-81:3
5.2 lnc-ATP6V1C1-9:5