Transcript: lnc-ATP8A1-1:7

Basic information

LNCipedia transcript ID: lnc-ATP8A1-1:7 
LNCipedia gene ID: lnc-ATP8A1-1
Location (hg38): chr4:42285822-42292622
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1096 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT096192
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 36.2341 non-coding 
CPAT coding probability 6.19% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ATP8A1-1:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ATP8A1-2:1
4.0 lnc-ATP8A1-2:1
4.1 lnc-ATP8A1-1:7
5.0 lnc-ATP8A1-1:7
5.1 lnc-GABRA4-19:7
5.2 lnc-ATP8A1-1:7