Transcript: lnc-ATP8B1-8:1

Basic information

LNCipedia transcript ID: lnc-ATP8B1-8:1 
LNCipedia gene ID: lnc-ATP8B1-8
Ensembl Gene ID: ENSG00000274354
Ensembl Transcript ID: ENST00000610389
Location (hg38): chr18:58511598-58512310
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 713 bp
Exons: 1
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000610389.1
Alternative gene names: ENSG00000274354.1; RP11-1151B14.5; AC105105.4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -84.4275 non-coding 
CPAT coding probability 0.15% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ATP8B1-8:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-AC090324.1-8:1
4.1 lnc-AC090324.1-8:1
5.0 lnc-AC090324.1-8:1
5.1 lnc-MBD2-39:1
5.2 lnc-ATP8B1-8:1