Transcript: lnc-AUNIP-2:1

Basic information

LNCipedia transcript ID: lnc-AUNIP-2:1 
LNCipedia gene ID: lnc-AUNIP-2
RefSeq ID: NR_024498
Location (hg38): chr1:25819954-25823606
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3653 bp
Exons: 1
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT001750; NR_024498; NR_024498.1
Alternative gene names: LOC646471


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -9.5003 non-coding 
CPAT coding probability 70.62% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-AUNIP-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AL020996.1-3:1
4.0 lnc-AL020996.1-1:5
4.1 lnc-AL020996.1-1:5
5.0 lnc-AL020996.1-1:5
5.1 lnc-CRYBG2-9:1
5.2 lnc-AUNIP-2:1