Transcript: lnc-AVL9-10:1

Basic information

LNCipedia transcript ID: lnc-AVL9-10:1 
LNCipedia gene ID: lnc-AVL9-10
Ensembl Gene ID: ENSG00000284839
Ensembl Transcript ID: ENST00000645498
Location (hg38): chr7:32427901-32431804
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 687 bp
Exons: 2
Sources: Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000645498.1
Alternative gene names: ENSG00000284839.1; AC018637.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -482.7625 non-coding 
CPAT coding probability 14.75% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-AVL9-10:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-CCDC129-10:1
5.1 lnc-CCDC129-10:1
5.2 lnc-AVL9-10:1