Transcript: lnc-AZIN2-5:1

Basic information

LNCipedia transcript ID: lnc-AZIN2-5:1 
LNCipedia gene ID: lnc-AZIN2-5
Ensembl Gene ID: ENSG00000270115
Ensembl Transcript ID: ENST00000602618
Location (hg38): chr1:33261212-33261680
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 469 bp
Exons: 1
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT002268; ENST00000602618.1
Alternative gene names: ENSG00000270115.1; RP11-415J8.7; AL513327.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -113.1301 non-coding 
CPAT coding probability 3.53% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-AZIN2-5:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ADC-5:1
4.0 lnc-ADC-5:1
4.1 lnc-ADC-5:1
5.0 lnc-ADC-5:1
5.1 lnc-GJB5-11:1
5.2 lnc-AZIN2-5:1