Transcript: lnc-B3GNT5-11:11

Basic information

LNCipedia transcript ID: lnc-B3GNT5-11:11 
LNCipedia gene ID: lnc-B3GNT5-11
RefSeq ID: NR_038302
Location (hg38): chr3:183447608-183456013
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1490 bp
Exons: 4
Sources: NONCODE v4; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT093647; NR_038302.1
Alternative gene names: ; LINC00888


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -80.5301 non-coding 
CPAT coding probability 20.44% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-B3GNT5-11:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-B3GNT5-1:2
4.0 LINC00888:2
4.1 LINC00888:2
5.0 LINC00888:2
5.1 lnc-B3GNT5-11:2
5.2 lnc-B3GNT5-11:11