Transcript: lnc-B3GNT5-11:17

Basic information

LNCipedia transcript ID: lnc-B3GNT5-11:17 
LNCipedia gene ID: lnc-B3GNT5-11
Location (hg38): chr3:183453643-183455541
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 794 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT093652
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -80.5301 non-coding 
CPAT coding probability 0.54% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-B3GNT5-11:17 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-B3GNT5-1:7
4.0 LINC00888:8
4.1 LINC00888:8
5.0 LINC00888:8
5.1 lnc-B3GNT5-11:9
5.2 lnc-B3GNT5-11:17