Transcript: lnc-B3GNT7-3:3

Basic information

LNCipedia transcript ID: lnc-B3GNT7-3:3 
LNCipedia gene ID: lnc-B3GNT7-3
Ensembl Gene ID: ENSG00000233538
Ensembl Transcript ID: ENST00000370380
Location (hg38): chr2:231452195-231453153
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 568 bp
Exons: 3
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000370380.2
Alternative gene names: ENSG00000233538.1; AC017104.2; AC017104.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 21.6562 non-coding 
CPAT coding probability 14.12% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-B3GNT7-3:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-AC017104.2.1-3:1
4.1 lnc-AC017104.2.1-3:1
5.0 lnc-AC017104.2.1-3:1
5.1 lnc-B3GNT7-3:2
5.2 lnc-B3GNT7-3:3