Transcript: lnc-B3GNTL1-4:1

Basic information

LNCipedia transcript ID: lnc-B3GNTL1-4:1 
LNCipedia gene ID: lnc-B3GNTL1-4
Location (hg38): chr17:83193520-83203169
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 9650 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000034914.1|MICT00000157276.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 7.8585 non-coding 
CPAT coding probability 3.53% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-B3GNTL1-4:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-B3GNTL1-4:1
5.0 lnc-B3GNTL1-4:1
5.1 lnc-CD7-31:1
5.2 lnc-B3GNTL1-4:1