Transcript: lnc-B3GNTL1-4:2

Basic information

LNCipedia transcript ID: lnc-B3GNTL1-4:2 
LNCipedia gene ID: lnc-B3GNTL1-4
Location (hg38): chr17:83201334-83203169
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1836 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000034914.1|FTMT26600004871.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 5.5272 non-coding 
CPAT coding probability 0.45% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-B3GNTL1-4:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-B3GNTL1-4:2
5.0 lnc-B3GNTL1-4:2
5.1 lnc-CD7-31:2
5.2 lnc-B3GNTL1-4:2