Transcript: lnc-B4GALNT3-2:4

Basic information

LNCipedia transcript ID: lnc-B4GALNT3-2:4 
LNCipedia gene ID: lnc-B4GALNT3-2
Location (hg38): chr12:642693-644350
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 438 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT025358
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -137.2829 non-coding 
CPAT coding probability 4.08% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-B4GALNT3-2:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-B4GALNT3-2:4
4.0 lnc-B4GALNT3-2:4
4.1 lnc-B4GALNT3-2:4
5.0 lnc-B4GALNT3-2:4
5.1 lnc-CLEC4D-158:4
5.2 lnc-B4GALNT3-2:4