Transcript: lnc-B4GALT7-4:1

Basic information

LNCipedia transcript ID: lnc-B4GALT7-4:1 
LNCipedia gene ID: lnc-B4GALT7-4
Ensembl Gene ID: ENSG00000249109
Ensembl Transcript ID: ENST00000502515
Location (hg38): chr5:177782197-177794396
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1517 bp
Exons: 3
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000502515.1
Alternative gene names: ENSG00000249109.1; RP11-1026M7.2; AC140125.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 4.6304 non-coding 
CPAT coding probability 6.69% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-B4GALT7-4:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-RP11-1026M7.2.1-4:1
4.1 lnc-RP11-1026M7.2.1-4:1
5.0 lnc-RP11-1026M7.2.1-4:1
5.1 lnc-MAML1-34:1
5.2 lnc-B4GALT7-4:1